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Cy5-bifunctional dye

PropertiesImage
MNX_IDMNXM47937 Image of MNXM47937
referencechebi:38039
formulaC45H52N4O14S2
global charge0
mol weight937.059
InChIKeyMGIODCZGPVDROX-UHFFFAOYSA-N
InChIInChI=1S/C45H52N4O14S2/c1-44(2)32-28-30(64(56,57)58)18-20-34(32)46(26-12-6-10-16-42(54)62-48-38(50)22-23-39(48)51)36(44)14-8-5-9-15-37-45(3,4)33-29-31(65(59,60)61)19-21-35(33)47(37)27-13-7-11-17-43(55)63-49-40(52)24-25-41(49)53/h5,8-9,14-15,18-21,28-29H,6-7,10-13,16-17,22-27H2,1-4H3,(H-,56,57,58,59,60,61)
SMILESCC1(C)C2=CC(S(=O)(=O)O)=CC=C2N(CCCCCC(=O)ON2C(=O)CCC2=O)C1=CC=CC=CC1=[N+](CCCCCC(=O)ON2C(=O)CCC2=O)C2=C(C=C(S(=O)(=O)[O-])C=C2)C1(C)C
MNX internals
InChI (mnx)InChI=1/C45H52N4O14S2/c1-44(2)32-28-30(64(56,57)58)18-20-34(32)46(26-12-6-10-16-42(54)62-48-38(50)22-23-39(48)51)36(44)14-8-5-9-15-37-45(3,4)33-29-31(65(59,60)61)19-21-35(33)47(37)27-13-7-11-17-43(55)63-49-40(52)24-25-41(49)53/h5,8-9,14-15,18-21,28-29H,6-7,10-13,16-17,22-27H2,1-4H3,(H-,56,57,58,59,60,61) Image of MNXM47937
SMILES (mnx)[CH3:1][C:44]1([CH3:2])[C:32]2=[C:34]([CH:20]=[CH:18][C:30]([S:64](=[O:56])([OH:57])=[O:58])=[CH:28]2)[N:46]([CH2:26][CH2:12][CH2:6][CH2:10][CH2:16][C:42](=[O:54])[O:62][N:48]2[C:38](=[O:50])[CH2:22][CH2:23][C:39]2=[O:51])[C:36]1=[CH:14][CH:8]=[CH:5][CH:9]=[CH:15][C:37]1=[N+:47]([CH2:27][CH2:13][CH2:7][CH2:11][CH2:17][C:43](=[O:55])[O:63][N:49]2[C:40](=[O:52])[CH2:24][CH2:25][C:41]2=[O:53])[C:35]2=[C:33]([CH:29]=[C:31]([S:65]([O-:59])(=[O:60])=[O:61])[CH:19]=[CH:21]2)[C:45]1([CH3:3])[CH3:4]
Parent-child relations graph
Occurences in reactions#reac
in my sandbox 0
in MNXref (generic)0
in models (compartimentalized) 0
Similar chemical compounds in external resources
IdentifierDescription

CHEBI:38039
chebi:38039
MGIODCZGPVDROX-UHFFFAOYSA-N
Cy5-bifunctional dye
1-{6-[(2,5-dioxopyrrolidin-1-yl)oxy]-6-oxohexyl}-2-[5-(1-{6-[(2,5-dioxopyrrolidin-1-yl)oxy]-6-oxohexyl}-3,3-dimethyl-5-sulfo-1,3-dihydro-2H-indol-2-ylidene)penta-1,3-dien-1-yl]-3,3-dimethyl-3H-indolium-5-sulfonate