MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
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Summary
Pick from repository
Import model
Upload reactions
Delete models
Upload genome
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Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
Create / Modify
Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Utilities
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MNXref ID mapper
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Documents
Getting started
A short tutorial
Model internals
About
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Info / How to cite
Search
Enter one or several terms to search for in MNXref:
You can search for chemicals, reactions or compartments
A
+
sign in front of a term will search for this exact term.
E.g.
MNXM123
,
glucose phosphate
,
+synthase
,
Golgi
Compounds
MNX chem id
MNX description
MNXM21349
a protein with sequence GKFKK
MNXM21350
a protein with sequence SGFRK-NH2
MNXM21351
a protein with sequence SGVFTQ
MNXM21352
a protein with sequence SGVTFQGKFKK
MNXM21354
a protein with sequence TSAVLQSGFRK-NH2
MNXM21353
a protein with-sequence TSAVLQ
MNXM164456
a farnesylated protein that ends with a CaaX sequence
MNXM743889
a geranylgeranylated protein that ends with a CaaL sequence
MNXM743890
a geranylgeranylated protein that ends with a CCXX sequence
MNXM743891
a geranylgeranylated protein that ends with a XCXC sequence
MNXM743892
a geranylgeranylated protein that ends with a XXCC sequence
MNXM743799
a protein that ends with a CaaL sequence
MNXM166825
a protein that ends with a CaaX sequence
MNXM743800
a protein that ends with an CCXX sequence
MNXM744075
a protein that ends with an XCXC sequence
MNXM744076
a protein that ends with an XXCC sequence
Reactions
MNX reac id
MNX description
MNXR116730
1
MNXM21350@MNXD1
+
1
MNXM21353@MNXD1
=
1
MNXM21354@MNXD1
+
1
WATER@MNXD1
MNXR116734
1
MNXM21349@MNXD1
+
1
MNXM21351@MNXD1
=
1
MNXM21352@MNXD1
+
1
WATER@MNXD1
Compartments
No result found